Created and maintained by Xiang-Jun Lu <xiangjun@x3dna.org>
Poster "DSSR-Enabled Automatic
Identification and Annotation of G-quadruplexes in the PDB"
Citation: Please cite the NAR'20 DSSR-PyMOL schematics paper,
or the NAR'15 DSSR method paper.
1 glyco-bond=s-s- groove=wnwn planarity=0.557 type=other nts=4 GGGG A.DG1,A.DG15,A.DG10,A.DG6 2 glyco-bond=---s groove=--wn planarity=0.631 type=other nts=4 GGGG A.DG2,A.DG14,A.DG11,A.DG5
In DSSR, a G4-helix is defined by stacking interactions of G-tetrads, regardless of backbone connectivity, and may contain more than one G4-stem.
In DSSR, a G4-stem is defined as a G4-helix with backbone connectivity. Bulges are also allowed along each of the four strands.