Created and maintained by Xiang-Jun Lu <xiangjun@x3dna.org>
Citation: Please cite the NAR'20 DSSR-PyMOL schematics paper and/or the NAR'15 DSSR method paper.
1 glyco-bond=---- sugar=---- groove=---- planarity=0.380 type=other nts=4 GGGG A.DG4,D.DG25,B.DG11,C.DG18 2 glyco-bond=---- sugar=---- groove=---- planarity=0.174 type=other nts=4 GGGG A.DG5,D.DG26,B.DG12,C.DG19 3 glyco-bond=---- sugar=---- groove=---- planarity=0.153 type=planar nts=4 GGGG A.DG6,D.DG27,B.DG13,C.DG20
In DSSR, a G4-helix is defined by stacking interactions of G-tetrads, regardless of backbone connectivity, and may contain more than one G4-stem.
In DSSR, a G4-stem is defined as a G4-helix with backbone connectivity. Bulges are also allowed along each of the four strands.