Created and maintained by Xiang-Jun Lu <xiangjun@x3dna.org>
Citation: Please cite the NAR'20 DSSR-PyMOL schematics paper and/or the NAR'15 DSSR method paper.
1 glyco-bond=s--s sugar=---- groove=w-n- planarity=0.105 type=planar nts=4 GGGG A.DG1,A.DG7,A.DG30,A.DG25 2 glyco-bond=-ss- sugar=---- groove=w-n- planarity=0.168 type=other nts=4 GGGG A.DG2,A.DG6,A.DG29,A.DG26
In DSSR, a G4-helix is defined by stacking interactions of G-tetrads, regardless of backbone connectivity, and may contain more than one G4-stem.
In DSSR, a G4-stem is defined as a G4-helix with backbone connectivity. Bulges are also allowed along each of the four strands.