Created and maintained by Xiang-Jun Lu <xiangjun@x3dna.org>
Poster "DSSR-Enabled Automatic
Identification and Annotation of G-quadruplexes in the PDB"
Citation: Please cite the NAR'20 DSSR-PyMOL schematics paper,
or the NAR'15 DSSR method paper.
1 glyco-bond=--s- groove=-wn- planarity=0.267 type=other nts=4 GGGG D.DG1,D.DG6,D.DG10,D.DG15 2 glyco-bond=ss-s groove=-wn- planarity=0.236 type=other nts=4 GGGG D.DG2,D.DG5,D.DG11,D.DG14
In DSSR, a G4-helix is defined by stacking interactions of G-tetrads, regardless of backbone connectivity, and may contain more than one G4-stem.
In DSSR, a G4-stem is defined as a G4-helix with backbone connectivity. Bulges are also allowed along each of the four strands.