Created and maintained by Xiang-Jun Lu <xiangjun@x3dna.org>
Poster "DSSR-Enabled Automatic
Identification and Annotation of G-quadruplexes in the PDB"
Citation: Please cite the NAR'20 DSSR-PyMOL schematics paper,
or the NAR'15 DSSR method paper.
1 glyco-bond=s--s groove=w-n- planarity=0.086 type=planar nts=4 GGGG A.DG1,A.DG7,A.DG19,A.DG13 2 glyco-bond=-ss- groove=w-n- planarity=0.129 type=planar nts=4 GGGG A.DG2,A.DG6,A.DG18,A.DG14
In DSSR, a G4-helix is defined by stacking interactions of G-tetrads, regardless of backbone connectivity, and may contain more than one G4-stem.
In DSSR, a G4-stem is defined as a G4-helix with backbone connectivity. Bulges are also allowed along each of the four strands.