Created and maintained by Xiang-Jun Lu <xiangjun@x3dna.org>
Citation: Please cite the NAR'20 DSSR-PyMOL schematics paper and/or the NAR'15 DSSR method paper.
1 glyco-bond=s--- sugar=---- groove=w--n planarity=0.108 type=planar nts=4 GGGG A.DG5,A.DG21,A.DG17,A.DG13 2 glyco-bond=s--- sugar=---3 groove=w--n planarity=0.139 type=planar nts=4 gGGG A.BGM6,A.DG20,A.DG16,A.DG12 3 glyco-bond=s--- sugar=---- groove=w--n planarity=0.284 type=other nts=4 gGGG A.BGM7,A.DG19,A.DG15,A.DG11
In DSSR, a G4-helix is defined by stacking interactions of G-tetrads, regardless of backbone connectivity, and may contain more than one G4-stem.
In DSSR, a G4-stem is defined as a G4-helix with backbone connectivity. Bulges are also allowed along each of the four strands.